DNA sequences

Part of the HIV Reverse Transcriptase gene:

Complete Genome
– BASE COUNT (for full genome) 3405 a 1742 c 2355 g 2135 t

An input for completeGenome

completeGenome = "baaccadbbddbbbdcaddccbacaabdabababbacccbbaccccdbacadddbbabdcabbdddccadc ... ccbdacbdacccaabbbabdcbddaacbbdbaadaaacbddcbbddcacdcbddaaacdacdcdcdcbbbcdbdcddcdcdcabdbdccd" ;

Show[GraphicsArray[{ourShow2[Characters[completeGenome], transProductionsForabcd, 100, {0, 25}, "HIV genome"]}]] ;

[Graphics:../HTMLFiles/4LetterWalksInDiamondLattice_268.gif]

s[completeGenome]

3405 a + 1742 b + 2355 c + 2135 d

HIV Env Gene (encodes envelope protein)

HIV$Env$Gene = "CTAGCAGAAGAAGAGGTAGTAATTAGATCTGCCAATTTCACAGACAATGCTAAAATCATAATAGTACAGCTGA ... uot;->"b", "G"->"c", "T"->"d"}] & ;

s[HIV$Env$Gene]

148 a + 50 b + 73 c + 89 d

Created by Mathematica  (February 18, 2004)